Farid Rashidi
Computational Oncologist and Data Scientist
Ph.D. in Computer Science, M.S. in Artificial Intelligence
 | P9 Stochastic modeling of single-cell gene expression adaptation reveals non-genomic contribution to evolution of tumor subclones Cell Systems Full text Supplementary |
 | P8 Genome-wide profiling of transcription factor activity in primary liver cancer using single-cell ATAC sequencing Cell Reports Full text Supplementary |
 | P7 Single-cell methylation sequencing data reveal succinct metastatic migration histories and tumor progression models Genome Research RECOMB 2023 Proceedings Full text Supplementary Code |
 | P6 Fast intratumor heterogeneity inference from single-cell sequencing data Nature Computational Science Full text Supplementary Code |
 | P5 Review on Studying the History of Tumor Evolution from Single-Cell Sequencing Data by Exploring the Space of Binary Matrices Journal of Computational Biology Full text |
 | P4 A Transcriptionally Distinct Subpopulation of Healthy Acinar Cells Exhibit Features of Pancreatic Progenitors and PDAC Cancer Research Full text Supplementary |
 | P3 PhISCS-BnB: a fast branch and bound algorithm for the perfect tumor phylogeny reconstruction problem Bioinformatics ISMB 2020 Proceedings Full text Supplementary Code Presentation |
 | P2 Clonal Evolution and Heterogeneity of Osimertinib Acquired Resistance Mechanisms in EGFR Mutant Lung Cancer Cell Reports Medicine Full text Supplementary |
 | P1 PhISCS: a combinatorial approach for subperfect tumor phylogeny reconstruction via integrative use of single-cell and bulk sequencing data Genome Research Full text Supplementary Code Presentation |